RNA polymerase II general transcription initiation factor activity

Go to external page http://purl.obolibrary.org/obo/GO_0016251


A general transcription initiation factor activity that contributes to transcription start site selection and transcription initiation of genes transcribed by RNA polymerase II. The general transcription factors for RNA polymerase II include TFIIB, TFIID, TFIIE, TFIIF, TFIIH and TATA-binding protein (TBP). In most species, RNA polymerase II transcribes all messenger RNAs (mRNAs), most untranslated regulatory RNAs, the majority of the snoRNAs, four of the five snRNAs (U1, U2, U4, and U5), and other small noncoding RNAs. For some small RNAs there is variability between species as to whether it is transcribed by RNA polymerase II or RNA polymerase III. However there are also rare exceptions, such as Trypanosoma brucei, where RNA polymerase I transcribes certain mRNAs in addition to its normal role in rRNA transcription. [ GOC:txnOH-2018 PMID:23442138 PMID:25693126 PMID:10384286 PMID:10747032 ]

This is just here as a test because I lose it

术语信息

comment

General transcription factors assemble with the RNA polymerase at promoter DNA to form the pre-initiation complex (PIC), bind to and open promoter DNA, initiate RNA synthesis and stimulate the escape of the polymerase from the promoter. Not all subunits of the general transcription factor are necessarily present in all promoters to initiate transcription. The distinction between general transcription factors and DNA-binding transcription factors is that the latter modulate the selection of which genes are expressed under specific conditions, while general transcription factors belong to the constitutive machinery required for transcription to occur.

definition

A general transcription initiation factor activity that contributes to transcription start site selection and transcription initiation of genes transcribed by RNA polymerase II. The general transcription factors for RNA polymerase II include TFIIB, TFIID, TFIIE, TFIIF, TFIIH and TATA-binding protein (TBP). In most species, RNA polymerase II transcribes all messenger RNAs (mRNAs), most untranslated regulatory RNAs, the majority of the snoRNAs, four of the five snRNAs (U1, U2, U4, and U5), and other small noncoding RNAs. For some small RNAs there is variability between species as to whether it is transcribed by RNA polymerase II or RNA polymerase III. However there are also rare exceptions, such as Trypanosoma brucei, where RNA polymerase I transcribes certain mRNAs in addition to its normal role in rRNA transcription.

has alternative id

GO:0001075

GO:0003703

GO:0000983

has exact synonym

basal RNA polymerase II transcription factor activity

general RNA polymerase II transcription factor activity

GTF2 activity

has obo namespace

molecular_function

has related synonym

RNA polymerase II core promoter sequence-specific DNA binding transcription factor activity

transcription factor activity, RNA polymerase II core promoter sequence-specific DNA binding

RNA polymerase II core promoter sequence-specific DNA binding transcription factor activity involved in preinitiation complex assembly

transcription factor activity, RNA polymerase II core promoter sequence-specific binding involved in preinitiation complex assembly

sequence-specific core promoter binding RNA polymerase II transcription factor activity involved in preinitiation complex assembly

id

GO:0016251

term tracker item

https://github.com/geneontology/go-ontology/issues/20253