全部本体列表
本体名称 | 简称 | 描述 | 加载时间 | 操作 |
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Animal Trait Ontology for Livestock | ATOL | ATOL (Animal Trait Ontology for Livestock) is an ontology of characteristics defining phenotypes of livestock in their environment (EOL). ATOL aims to: - provide a reference ontology of phenotypic traits of farm animals for the international scientificand educational - communities, farmers, etc.; - deliver this reference ontology in a language which can be used by computers in order to support database management, semantic analysis and modeling; - represent traits as generic as possible for livestock vertebrates; - make the ATOL ontology as operational as possible and closely related to measurement techniques; - structure the ontology in relation to animal production. | 2022-01-27 |
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The Biological Collections Ontology | BCO | The BCO supports the interoperability of biodiversity and biodiversity related data, including data on museum collections, environmental/metagenomic samples, and ecological surveys. A key aspect of the BCO is distinguishing among material samples (i.e. specimens), observing processes, and data about either of those entities. | 2023-10-13 |
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Comparative Data Analysis Ontology | CDAO | The Comparative Data Analysis Ontology (CDAO) provides a framework for understanding data in the context of evolutionary-comparative analysis. This comparative approach is used commonly in bioinformatics and other areas of biology to draw inferences from a comparison of differently evolved versions of something, such as differently evolved versions of a protein. In this kind of analysis, the things-to-be-compared typically are classes called 'OTUs' (Operational Taxonomic Units). The OTUs can represent biological species, but also may be drawn from higher or lower in a biological hierarchy, anywhere from molecules to communities. The features to be compared among OTUs are rendered in an entity-attribute-value model sometimes referred to as the 'character-state data model'. For a given character, such as 'beak length', each OTU has a state, such as 'short' or 'long'. The differences between states are understood to emerge by a historical process of evolutionary transitions in state, represented by a model (or rules) of transitions along with a phylogenetic tree. CDAO provides the framework for representing OTUs, trees, transformations, and characters. The representation of characters and transformations may depend on imported ontologies for a specific type of character. | 2022-01-27 |
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chemical information ontology (cheminf) - information entities about chemical entities | CHEMINF | Includes terms for the descriptors commonly used in cheminformatics software applications and the algorithms which generate them. | 2022-01-27 |
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Cell Ontology | CL | An ontology of cell types. | 2022-01-27 |
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CTO: Core Ontology of Clinical Trials | CTO | The core Ontology of Clinical Trials (CTO) will serve as a structured resource integrating basic terms and concepts in the context of clinical trials. Thereby covering clinicaltrails.gov. CoreCTO will serve as a basic ontology to generate extended versions for specific applications such as annotation of variables in study documents from clinical trials. | 2022-01-27 |
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Gene Ontology | GO | The Gene Ontology (GO) provides a framework and set of concepts for describing the functions of gene products from all organisms. | 2022-01-27 |
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Infectious Disease Ontology | IDO | A set of interoperable ontologies that will together provide coverage of the infectious disease domain. IDO core is the upper-level ontology that hosts terms of general relevance across the domain, while extension ontologies host terms to specific to a particular part of the domain. | 2022-01-27 |
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Ontology for General Medical Science | OGMS | The Ontology for General Medical Science (OGMS) is an ontology of entities involved in a clinical encounter. OGMS includes very general terms that are used across medical disciplines, including: 'disease', 'disorder', 'disease course', 'diagnosis', 'patient', and 'healthcare provider'. OGMS uses the Basic Formal Ontology (BFO) as an upper-level ontology. The scope of OGMS is restricted to humans, but many terms can be applied to a variety of organisms. OGMS provides a formal theory of disease that can be further elaborated by specific disease ontologies. This theory is implemented using OWL-DL and OBO Relation Ontology relations and is available in OWL and OBO formats. OGMS is based on the papers Toward an Ontological Treatment of Disease and Diagnosis and On Carcinomas and Other Pathological Entities. The ontology attempts to address some of the issues raised at the Workshop on Ontology of Diseases (Dallas, TX) and the Signs, Symptoms, and Findings Workshop(Milan, Italy). OGMS was formerly called the clinical phenotype ontology. Terms from OGMS hang from the Basic Formal Ontology. | 2022-01-27 |
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Organchem Ontology | ORGANCHEMONTOLOGY | The medicine and natural product dataset contains mainly medicine and natural product information for compounds. In particular, it is composed of the following 2 aspects: drug information: physicochemical properties, pharmacological toxicity, uses, etc.; natural product information: applications, development status, decomposition coefficients, toxicity test data, etc. | 2023-07-12 |
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Plantplus Ontology | PLANTPLUS | 本文件旨在明确植物科学数据交换时的元数据规范。 | 2024-03-29 |
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Plant Ontology | PO | The Plant Ontology is a structured vocabulary and database resource that links plant anatomy, morphology and growth and development to plant genomics data. | 2022-01-27 |
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Scbg Ontology | SCBG | South China Botanical Garden of the Chinese Academy of Sciences, formerly known as the National Sun Yat-sen University Institute of Agricultural and Forestry Botany, by the famous botanist Chen Huanyong academician founded in 1929. On May 30, 2022, the State Council approved the establishment of the South China National Botanical Garden based on the South China Botanical Garden of the Chinese Academy of Sciences. The whole garden consists of three parks. | 2024-04-03 |
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Sequence types and features ontology | SO | A structured controlled vocabulary for sequence annotation, for the exchange of annotation data and for the description of sequence objects in databases. | 2022-01-27 |
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National Tibetan Plateau Data Ontology | TPDCONTOLOGY | The National Tibetan Plateau Data Ontology is a structured vocabulary that describes National Tibetan Plateau Data. | 2023-02-21 |
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